IntegronFinder
v2.0.2
  • User Guide
    • Introduction
    • Installation
      • IntegronFinder dependencies
      • Installation procedure
        • From Version 2.0
        • From Version 1.5.1 and after
        • For Version 1.5 and before
      • Uninstallation procedure
        • From Version 1.5.1 and after
        • From Version 1.0 to Version 1.5
      • How to install Python
    • What’s new ?
      • In Version 2.0
    • Quick start
      • For impatient
      • Input and Outputs
        • Inputs
        • Custom protein file
        • Outputs
      • For everyone
        • Thorough local detection
        • CALIN detection
        • Functional annotation
        • Search for promoter and attI sites
        • Keep intermediate results
        • Topology
      • For big data people
        • Parallelization
      • For integron diggers
        • Clustering of elements
        • Integrase
        • attC evalue
        • attC size
        • Palindromes
        • attC alignements
    • web server
      • Galaxy
        • How to use it
        • Results
    • References
  • Developer Guide
    • Developer installation
    • Build a new release
    • Send changes to upstream repository
    • Tests
      • Running tests
      • Adding tests
    • Documentation
    • Architecture Overview
      • Project files and directories
        • Files
        • Directories
      • Technical overview
    • Integron_finder API Reference
      • annotation
      • attc
      • config
      • hmm
      • infernal
      • integrase
      • integron
      • prot_db
      • results
      • topology
      • utils
IntegronFinder
  • Docs »
  • Index
  • Edit on GitHub

Index

_ | I | T

_

  • __getitem__() (integron_finder.topology.Topology method)
  • __init__() (integron_finder.topology.Topology method)
  • __weakref__ (integron_finder.topology.Topology attribute)
  • _parse() (integron_finder.topology.Topology method)
  • _parse_topology() (integron_finder.topology.Topology method)

I

  • integron_finder.topology (module)

T

  • Topology (class in integron_finder.topology)

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