.. IntegronFinder - Detection of Integron in DNA sequences


Welcome to IntegronFinder's documentation!
==========================================

IntegronFinder is a program that detects integrons in DNA sequences.
The program is available on a webserver
:ref:`Galaxy Pasteur <galaxy>`, or by command line (`IntegronFinder on github`_).

   * You already read the :ref:`paper <references>` and want to install it ? Click :ref:`here <install>`
   * You did not read the paper (yet) but you would like to have rapid introduction to integrons and the program?
     click :ref:`here <introduction>`

.. _`IntegronFinder on github`: https://github.com/gem-pasteur/Integron_Finder


User Guide
==========
.. toctree::
   :maxdepth: 2

   user_guide/index


Developer Guide
===============
.. toctree::
   :maxdepth: 2

   developer_guide/index

Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`